The ending... (SPOILERS)
I can usually follow a film’s story pretty well but AC’s last third baffled me.
SPOILERS
Did Sophia decide to let Cal kill her father simply because he slightly misrepresented his reasons for wanting to retrieve the Apple of Eden? Or are we to imply that the woman she saw in the gathering of Assassins in the Animus was her mother and that she inferred that her father killed her mother? Also what was she so ramped up about as we cut to credits? I mean, she LET this all happen. Is this her origin story as a villain?